Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AN57DNA repair protein. (944 aa)    
Predicted Functional Partners:
A0A178ALZ7
Uncharacterized protein.
   
 0.999
A0A178AZ84
DNA repair protein.
    
 0.999
A0A178B3A4
DNA repair helicase rad25.
  
 0.998
A0A178AQ89
DNA repair helicase.
   
 0.997
A0A178A741
Rad4-domain-containing protein.
    
 0.994
A0A178AEY9
Rad4-domain-containing protein.
    
 0.994
A0A178AWF3
UV excision repair protein Rad23.
    
 0.992
A0A178B7F9
PIN domain-like protein.
   
 0.992
A0A178AUV9
Asparaginyl-tRNA synthetase.
  
 0.991
A0A178ATF0
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.990
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.