Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AN70TBC-domain-containing protein. (1165 aa)    
Predicted Functional Partners:
A0A178B7A6
Septum-promoting GTP-binding protein 1.
    
 0.947
A0A178AXS0
Uncharacterized protein.
    
 0.917
A0A178B6J2
DUF1740-domain-containing protein.
    
 0.888
A0A178AJZ0
NCA2-domain-containing protein.
    
 0.876
A0A178AEZ0
Phosphatases II.
    
 
 0.750
A0A178B0G6
Uncharacterized protein.
    
 0.724
A0A178AQW3
Nucleoside diphosphate kinase.
    
 
 0.715
A0A178B2M8
RhoGAP-domain-containing protein.
    
 0.712
A0A178APD9
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
   0.691
A0A178AWL7
HORMA domain-containing protein.
    
 
 0.680
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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