Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178AN90GTP-binding protein; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)    
Predicted Functional Partners:
A0A178AE20
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.997
A0A178AM97
WD_REPEATS_REGION domain-containing protein.
   
 0.997
A0A178AUD8
Protein transport protein Sec24.
   
 0.997
A0A178APX6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
   
 0.995
A0A178AAZ8
Uncharacterized protein.
    
 0.990
A0A178AUU5
Uncharacterized protein.
   
 0.988
A0A178AYD2
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.986
A0A178AUG0
Uncharacterized protein.
    
 0.901
A0A178AWA0
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.886
A0A178B3P1
Supernatant protein factor, C-terminal domain-containing protein.
   
 0.854
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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