Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANE5F-box domain-containing protein. (427 aa)    
Predicted Functional Partners:
A0A178B941
Uncharacterized protein.
   
 0.874
A0A178B449
DNA damage-binding protein 1.
    
 0.803
A0A178AQA6
DUF3591 domain-containing protein.
   
 0.744
A0A178A883
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.681
A0A178AKW7
rRNA processing protein Ipi1.
   
 0.671
A0A178AGB3
Pkinase-domain-containing protein.
   
 0.667
A0A178AUZ5
Kinase-like protein.
   
 0.667
A0A178B9N7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.667
A0A178AWL7
HORMA domain-containing protein.
   
 0.663
A0A178AUK6
Uncharacterized protein.
   
 0.661
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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