Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANF2Uncharacterized protein. (253 aa)    
Predicted Functional Partners:
A0A178A862
Retinol dehydrogenase 12.
     
  0.725
A0A178AC26
NAD(P)-binding protein.
     
  0.725
A0A178AJ58
NAD(P)-binding protein.
     
  0.725
A0A178AM63
NAD(P)-binding protein.
     
  0.662
A0A178AW43
Putative short-chain dehydrogenase.
     
  0.662
A0A178AWE8
Short-chain dehydrogenase/reductase family protein.
     
  0.662
A0A178AC95
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
  0.644
A0A178B0Z1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
  0.644
A0A178AJ28
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
     
  0.589
A0A178B7E7
FSH1-domain-containing protein.
     
  0.589
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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