Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANI0RING-type domain-containing protein. (450 aa)    
Predicted Functional Partners:
A0A178AAD6
DUF1746-domain-containing protein.
     
  0.802
A0A178AMP1
Ubiquitin-like domain-containing protein.
     
  0.727
A0A178BEQ4
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
  0.687
A0A178B6G2
UBX domain-containing protein.
    
 0.672
A0A178AF96
Uncharacterized protein.
    
  0.636
A0A178ABP3
Uncharacterized protein.
    
 0.576
A0A178AZ29
RRN7-type domain-containing protein.
    
 0.576
A0A178AG67
Polyubiquitin.
    
  0.543
A0A178AWJ7
Ubiquitin-domain-containing protein.
    
  0.543
A0A178AV55
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.520
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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