Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178ANM4Glycoside hydrolase. (365 aa)    
Predicted Functional Partners:
A0A178B019
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
     
 0.956
A0A178B1Y7
Pectin lyase-like protein.
     
 0.912
A0A178AS52
Pectate lyase.
    
 0.909
A0A178A9W4
Aldo/keto reductase.
     
  0.874
A0A178ANH7
NAD(P)-binding protein.
     
  0.874
A0A178AW76
Alpha-L-arabinofuranosidase B.
     
 0.874
A0A178AIA5
Pectin lyase-like protein.
     
 0.870
A0A178B324
Polygalacturonase.
    
 0.866
A0A178B2F3
Glycoside hydrolase.
     
  0.859
A0A178BBY6
Alpha-L-arabinofuranosidase protein-like protein.
     
  0.859
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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