A0A178ANN4 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178ANN4

Alcohol dehydrogenase GroES-like domain-containing protein. (425 aa)

Predicted Functional Partners:

A0A178B5Z9

0.588

A0A178AK82

0.528

A0A178AAL2

0.495

A0A178AQT0

0.495

A0A178AF07

0.486

A0A178B986

0.486

A0A178AST7

0.483

A0A178B8W0

0.472

A0A178A8K8

0.462

A0A178AC74

0.462

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178A8K8	A0A178AC74	Serine palmitoyltransferase 2.	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	0.724
A0A178A8K8	A0A178AF07	Serine palmitoyltransferase 2.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.724
A0A178A8K8	A0A178ANN4	Serine palmitoyltransferase 2.	Alcohol dehydrogenase GroES-like domain-containing protein.	0.462
A0A178AAL2	A0A178ANN4	Pyrid_ox_like domain-containing protein.	Alcohol dehydrogenase GroES-like domain-containing protein.	0.495
A0A178AC74	A0A178A8K8	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	Serine palmitoyltransferase 2.	0.724
A0A178AC74	A0A178AF07	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.724
A0A178AC74	A0A178ANN4	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	Alcohol dehydrogenase GroES-like domain-containing protein.	0.462
A0A178AF07	A0A178A8K8	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Serine palmitoyltransferase 2.	0.724
A0A178AF07	A0A178AC74	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	0.724
A0A178AF07	A0A178ANN4	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Alcohol dehydrogenase GroES-like domain-containing protein.	0.486
A0A178AF07	A0A178B8W0	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.	0.482
A0A178AK82	A0A178ANN4	Mannose-6-phosphate isomerase.	Alcohol dehydrogenase GroES-like domain-containing protein.	0.528
A0A178AK82	A0A178AST7	Mannose-6-phosphate isomerase.	Phosphoglucomutase, first 3 domain-containing protein; Belongs to the phosphohexose mutase family.	0.479
A0A178AK82	A0A178B986	Mannose-6-phosphate isomerase.	Aldolase.	0.442
A0A178ANN4	A0A178A8K8	Alcohol dehydrogenase GroES-like domain-containing protein.	Serine palmitoyltransferase 2.	0.462
A0A178ANN4	A0A178AAL2	Alcohol dehydrogenase GroES-like domain-containing protein.	Pyrid_ox_like domain-containing protein.	0.495
A0A178ANN4	A0A178AC74	Alcohol dehydrogenase GroES-like domain-containing protein.	5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.	0.462
A0A178ANN4	A0A178AF07	Alcohol dehydrogenase GroES-like domain-containing protein.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.486
A0A178ANN4	A0A178AK82	Alcohol dehydrogenase GroES-like domain-containing protein.	Mannose-6-phosphate isomerase.	0.528
A0A178ANN4	A0A178AQT0	Alcohol dehydrogenase GroES-like domain-containing protein.	Pyrid_ox_like domain-containing protein.	0.495