Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANQ0Rad21_Rec8_N domain-containing protein. (747 aa)    
Predicted Functional Partners:
A0A178A889
STAG-domain-containing protein.
   
 0.999
A0A178AWC5
Structural maintenance of chromosomes protein.
   
 0.995
A0A178AVL6
Uncharacterized protein.
    
 0.994
A0A178B9G5
Peptidase C50 domain-containing protein.
   
 0.994
A0A178B966
Uncharacterized protein.
   
 0.990
A0A178AIK2
Uncharacterized protein.
   
 0.988
A0A178ACD8
Uncharacterized protein.
   
 0.967
A0A178ATE9
DNA/RNA polymerase.
   
 0.967
A0A178B450
DNA topoisomerase IV, alpha subunit.
    
 
 0.956
A0A178B637
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 
 0.949
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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