Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANY4NAD(P)-binding protein. (345 aa)    
Predicted Functional Partners:
A0A178BCE1
Alpha-L RNA-binding motif-containing protein.
   
  0.853
A0A178AEN0
Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.838
A0A178AHK1
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.838
A0A178ARD9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
  0.837
A0A178B5I8
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.836
A0A178BDA3
40s ribosomal protein-like protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.836
A0A178AR01
40s ribosomal protein-like protein s20.
   
  0.835
A0A178B4A3
40S ribosomal protein-like protein S19.
   
  0.835
A0A178ANE0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
  0.834
A0A178AVV9
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.834
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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