Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ANZ2Uncharacterized protein; Belongs to the complex I LYR family. (283 aa)    
Predicted Functional Partners:
A0A178AMH5
SNF5-domain-containing protein.
    
 0.893
A0A178AL01
SRF-TF-domain-containing protein.
    
 0.856
A0A178AMB6
EF-hand domain-containing protein.
    
 0.702
A0A178AII7
L domain-like protein.
    
 0.688
A0A178APM2
Uncharacterized protein.
    
 0.688
A0A178AQW3
Nucleoside diphosphate kinase.
    
 0.651
A0A178AS34
Uncharacterized protein.
    
  0.645
A0A178B9Q6
Phosphodiesterase.
    
  0.641
A0A178AZ42
Uncharacterized protein.
    
 0.634
A0A178B1Y0
U2 small nuclear ribonucleo protein A.
    
 0.620
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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