STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178APH5DUF1783-domain-containing protein. (224 aa)    
Predicted Functional Partners:
A0A178B4H3
zf-Mss51 domain-containing protein.
   
 
 0.980
A0A178B851
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
 
 0.959
A0A178AXG7
ARM repeat-containing protein.
    
   0.916
A0A178AI74
Uncharacterized protein.
    
 0.714
A0A178B124
Uncharacterized protein.
    
 0.714
A0A178B892
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
  0.641
A0A178AE80
Uncharacterized protein.
  
 
  0.616
A0A178AQW2
Cytochrome c oxidase subunit VI.
    
 0.582
A0A178ALG7
Tryptophan synthase.
     
  0.573
A0A178ADP3
Uncharacterized protein.
   
  0.557
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.