STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178API4RabGAP/TBC. (749 aa)    
Predicted Functional Partners:
A0A178AG98
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 0.994
A0A178AT77
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.992
A0A178AAC5
Vacuolar protein sorting-associated protein 26.
   
 0.987
A0A178B7D3
Phox-like protein.
    
 0.953
A0A178B836
Vacuolar protein sorting-associated protein-like protein vps5.
    
 0.945
A0A178B3I1
Ras-domain-containing protein.
   
 
 0.933
A0A178AYK3
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.909
A0A178AJZ0
NCA2-domain-containing protein.
    
 0.905
A0A178AHE9
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
    
 0.885
A0A178AK74
CNH domain-containing protein.
   
 0.870
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.