STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178API4RabGAP/TBC. (749 aa)    
Predicted Functional Partners:
A0A178AG98
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.952
A0A178AT77
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.876
A0A178AAC5
Vacuolar protein sorting-associated protein 26.
   
 
 0.853
A0A178B3I1
Ras-domain-containing protein.
   
 
 0.697
A0A178AS11
GTPase activating protein-like protein GYP1.
    
 
0.529
A0A178B7D3
Phox-like protein.
    
 
 0.520
A0A178AW09
Ras-related protein rab-like protein-11B.
    
 
 0.517
A0A178AZD4
Rab-GAP TBC domain-containing protein.
    
 
 0.515
A0A178AXX9
Peroxin-3.
      
 0.507
A0A178AW70
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.486
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.