STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A178API7DNA mismatch repair protein. (966 aa)    
Predicted Functional Partners:
A0A178B2P5
DNA mismatch repair protein MutL.
    
0.993
A0A178APU8
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.937
A0A178ALM0
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.906
A0A178B8K7
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.906
A0A178B934
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.906
A0A178BAL7
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.906
A0A178B4Y8
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.888
A0A178BFP0
DNA mismatch repair protein MutS.
  
 0.888
A0A178ADR6
Vacuolar protein sorting-associated protein-like protein VPS4; Belongs to the AAA ATPase family.
    
   0.853
A0A178ABT4
PIN domain-like protein.
    
 0.825
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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