Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A178APK4Alpha/beta-hydrolase. (277 aa)    
Predicted Functional Partners:
A0A178AVP3
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.707
A0A178AY40
Uncharacterized protein.
   
 0.667
A0A178AVF5
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.666
A0A178APN4
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.647
A0A178B4F9
Nudix hydrolase domain-containing protein.
    
  0.632
A0A178AQW3
Nucleoside diphosphate kinase.
     
  0.596
A0A178AG24
Flavo protein.
  
 
 0.532
A0A178AGJ9
Flavo protein.
  
 
 0.532
A0A178AVB8
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
   0.501
A0A178B2C1
Thymidylate synthase.
    
 0.500
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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