Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178APK8Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
A0A178B4Q1
HET domain-containing protein.
  
 
  0.526
A0A178A8D3
HET-domain-containing protein.
  
 
  0.496
A0A178A9Y5
HET-domain-containing protein.
  
 
  0.496
A0A178AK49
HET-domain-containing protein.
  
 
  0.487
A0A178B719
HET-domain-containing protein.
  
 
  0.487
A0A178B1X4
HET-domain-containing protein.
  
  
  0.483
A0A178AC89
HET-domain-containing protein.
  
 
  0.477
A0A178B880
HET-domain-containing protein.
  
 
  0.471
A0A178B106
HET-domain-containing protein.
  
 
  0.470
A0A178AUY2
HET-domain-containing protein.
  
     0.466
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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