Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178APL7Alpha/beta-hydrolase. (236 aa)    
Predicted Functional Partners:
A0A178AXE9
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.489
A0A178ADT3
ClpP/crotonase.
    
 0.458
A0A178B2I1
ClpP/crotonase.
    
 0.458
A0A178B1M7
NAD(P)-binding protein.
    
  0.426
A0A178BA85
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.426
A0A178B3C9
Ferredoxin.
   
  0.421
A0A178BF97
Lactamase_B domain-containing protein.
   
  0.421
A0A178BBL4
TPR-like protein.
    
  0.415
A0A178AF72
Thiolase.
   
  0.408
A0A178AUF0
Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
   
  0.408
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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