Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178APT4Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (208 aa)    
Predicted Functional Partners:
A0A178ACN3
Prefoldin.
   
 0.999
A0A178AMN9
Prefoldin alpha subunit.
   
 0.999
A0A178B856
Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family.
   
 0.999
A0A178BCR9
Prefoldin beta-like protein.
   
 0.999
A0A178AMR9
Prefoldin.
   
 0.993
A0A178B5U5
T-complex protein 1.
   
 0.881
A0A178ARP5
SEC14 cytosolic factor.
 
  
   0.844
A0A178ATT8
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
   0.821
A0A178AYU7
Histone H2A; Belongs to the histone H2A family.
   
   0.805
A0A178BAE3
T-complex protein 1 subunit delta.
   
 0.805
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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