Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178APX0Uncharacterized protein. (528 aa)    
Predicted Functional Partners:
A0A178ACZ3
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
    
 0.478
A0A178AC95
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
     
 0.467
A0A178B0Z1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
     
 0.467
A0A178A7C6
Di-copper centre-containing protein.
    
  0.442
A0A178ATM1
Actin depolymerizing protein.
    
 
 0.427
A0A178AT49
PHD-type domain-containing protein.
    
  0.420
A0A178AU90
DNA-directed RNA polymerases I.
    
  0.413
A0A178B0N7
Lysophospholipase.
    
  0.413
A0A178AKS1
Insert subdomain of RNA polymerase alpha subunit.
    
  0.412
A0A178AIX3
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.410
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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