Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178APZ6Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (248 aa)    
Predicted Functional Partners:
A0A178B6D9
Uncharacterized protein.
  
 0.996
A0A178AQ02
Mitochondrial 54S ribosomal protein YmL9.
  
 0.994
A0A178ARE4
Ribosomal protein L15.
  
 0.994
A0A178APK0
Ribosomal protein L2.
  
 0.993
A0A178APU2
Uncharacterized protein.
  
 0.993
A0A178B370
Ribosomal protein S12.
  
 
 0.993
A0A178AM36
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.992
A0A178ARN8
Ribosomal protein L4.
 
 
 0.992
A0A178ASL3
50S ribosomal protein-like protein L13.
 
 
 0.992
A0A178B168
MRP-L47-domain-containing protein.
   
 0.992
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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