A0A178AQB1 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178AQB1

Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (537 aa)

Predicted Functional Partners:

A0A178AGK1

0.897

A0A178ABV4

0.883

A0A178B6N3

0.869

A0A178B2M8

0.853

A0A178ALG7

0.850

A0A178ADX1

0.822

A0A178AYR8

0.822

A0A178AF07

0.810

A0A178ACK5

0.799

A0A178ATD8

0.799

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178ABV4	A0A178ACK5	Serine/threonine-protein phosphatase.	HRDC domain-containing protein.	0.804
A0A178ABV4	A0A178AGK1	Serine/threonine-protein phosphatase.	SAPS-domain-containing protein.	0.992
A0A178ABV4	A0A178AQB1	Serine/threonine-protein phosphatase.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.883
A0A178ABV4	A0A178ATD8	Serine/threonine-protein phosphatase.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.855
A0A178ABV4	A0A178B2M8	Serine/threonine-protein phosphatase.	RhoGAP-domain-containing protein.	0.650
A0A178ABV4	A0A178B6N3	Serine/threonine-protein phosphatase.	WD_REPEATS_REGION domain-containing protein.	0.544
A0A178ACK5	A0A178ABV4	HRDC domain-containing protein.	Serine/threonine-protein phosphatase.	0.804
A0A178ACK5	A0A178AGK1	HRDC domain-containing protein.	SAPS-domain-containing protein.	0.533
A0A178ACK5	A0A178AQB1	HRDC domain-containing protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.799
A0A178ACK5	A0A178B6N3	HRDC domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.975
A0A178ADX1	A0A178AQB1	Kinase-like protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.822
A0A178ADX1	A0A178AYR8	Kinase-like protein.	Calmodulin dependent protein kinase.	0.987
A0A178ADX1	A0A178B2M8	Kinase-like protein.	RhoGAP-domain-containing protein.	0.416
A0A178AF07	A0A178ALG7	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Tryptophan synthase.	0.999
A0A178AF07	A0A178AQB1	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.810
A0A178AGK1	A0A178ABV4	SAPS-domain-containing protein.	Serine/threonine-protein phosphatase.	0.992
A0A178AGK1	A0A178ACK5	SAPS-domain-containing protein.	HRDC domain-containing protein.	0.533
A0A178AGK1	A0A178AQB1	SAPS-domain-containing protein.	Uncharacterized protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.897
A0A178AGK1	A0A178ATD8	SAPS-domain-containing protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.538
A0A178ALG7	A0A178AF07	Tryptophan synthase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.999