Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AQC5UNC-50 protein. (280 aa)    
Predicted Functional Partners:
A0A178B3I1
Ras-domain-containing protein.
    
   0.823
A0A178B1H2
Sec7-domain-containing protein.
    
 
 0.764
A0A178B569
ARF/SAR superfamily.
    
 
 0.671
A0A178AXP1
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 
 0.630
A0A178APW8
GRIP domain-containing protein.
    
   0.607
A0A178AYC4
Dor1-domain-containing protein.
    
   0.599
A0A178AXG8
Mannosyltransferase.
      
 0.523
A0A178AXZ3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.523
A0A178AVB3
Uncharacterized protein.
      
 0.444
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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