Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A178AQL0Letm1 RBD domain-containing protein. (329 aa)    
Predicted Functional Partners:
A0A178AIP4
Mitochondrial-processing peptidase-like protein subunit beta; Belongs to the peptidase M16 family.
   
 0.718
A0A178AX38
ARM repeat-containing protein.
    
   0.562
A0A178AXG7
ARM repeat-containing protein.
    
   0.562
A0A178B6F6
60S ribosomal protein-like protein L2/L8.
    
 
 0.540
A0A178AVV9
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.527
HCR1
Eukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.526
A0A178B6L1
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.522
A0A178B3I6
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
   0.518
A0A178B7C4
40S ribosomal protein-like protein S22; Belongs to the universal ribosomal protein uS8 family.
    
   0.518
A0A178BA21
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
   0.518
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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