Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AQL6DUF791-domain-containing protein. (459 aa)    
Predicted Functional Partners:
A0A178AVL6
Uncharacterized protein.
     
  0.686
A0A178AWC5
Structural maintenance of chromosomes protein.
     
  0.686
A0A178B5R1
SPRY-domain-containing protein.
   
  
 0.664
A0A178ANQ0
Rad21_Rec8_N domain-containing protein.
     
  0.610
A0A178A889
STAG-domain-containing protein.
     
  0.547
A0A178AXQ1
Uncharacterized protein.
      
 0.519
A0A178AQU2
Metal-dependent protein hydrolase.
      
 0.517
A0A178AMN9
Prefoldin alpha subunit.
      
 0.484
A0A178AMA1
Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.
      
 0.417
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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