STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AR42GroES-like protein. (392 aa)    
Predicted Functional Partners:
A0A178B5Z9
Xylulose kinase.
  
 
 0.588
A0A178AK82
Mannose-6-phosphate isomerase.
   
  
 0.528
A0A178AAL2
Pyrid_ox_like domain-containing protein.
   
  
 0.495
A0A178AQT0
Pyrid_ox_like domain-containing protein.
   
  
 0.495
A0A178AF07
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.486
A0A178B986
Aldolase.
  
 
  0.486
A0A178AST7
Phosphoglucomutase, first 3 domain-containing protein; Belongs to the phosphohexose mutase family.
   
 0.483
A0A178B8W0
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
   
 
 0.472
A0A178A8K8
Serine palmitoyltransferase 2.
  
 
 0.462
A0A178AC74
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.462
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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