Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AR55DUF602-domain-containing protein. (325 aa)    
Predicted Functional Partners:
A0A178AHF8
DUF572-domain-containing protein.
  
   
 0.725
A0A178ASM8
TRM-domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
    
   0.692
A0A178AB26
Tyrosine--tRNA ligase.
    
   0.614
A0A178B5S2
Nucleic acid-binding protein.
    
   0.545
A0A178B7U5
Uncharacterized protein.
      
 0.537
A0A178AFA4
Plus-3-domain-containing protein.
      
 0.535
A0A178A8H0
Oligosaccharide translocation protein RFT1; May participate in the translocation of oligosaccharide from the cytoplasmic side to the lumenal side of the endoplasmic reticulum membrane; Belongs to the RFT1 family.
      
 0.530
A0A178B2Y9
Uncharacterized protein.
      
 0.527
EFM4
Protein-lysine N-methyltransferase EFM4; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that mono- and dimethylates elongation factor 1-alpha at 'Lys-316'. May play a role in intracellular transport. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
    
   0.505
A0A178ANA4
Uncharacterized protein.
      
 0.482
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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