STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ARF5Fungal_trans domain-containing protein. (618 aa)    
Predicted Functional Partners:
A0A178A9Z7
GDPD-domain-containing protein.
    
  0.760
A0A178B3V9
Uncharacterized protein.
    
  0.747
A0A178BBU9
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.747
A0A178AEG5
Uncharacterized protein.
    
  0.586
A0A178AJW4
NUC189-domain-containing protein.
    
  0.468
A0A178B8U7
Small nucleolar ribonucleo protein-like protein complex subunit.
    
  0.460
A0A178ASZ4
WD40 repeat-like protein.
    
  0.457
A0A178APR5
WD40 repeat-like protein.
    
  0.434
A0A178APW8
GRIP domain-containing protein.
    
  0.430
A0A178B4P4
BP28CT domain-containing protein.
    
  0.424
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.