Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ARH9Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
A0A178AFZ7
BRO1-domain-containing protein.
    
 
 0.983
IQ06DRAFT_4209
Arrestin_C domain-containing protein.
   
 0.981
A0A178AEB5
Cysteine proteinase; Belongs to the peptidase C2 family.
    
 0.971
A0A178AX63
Uncharacterized protein.
    
 
 0.969
A0A178ALW4
Uncharacterized protein.
    
 
 0.945
A0A178B344
BRO1-domain-containing protein.
    
 
 0.923
A0A178B9S5
Pali-domain-containing protein.
   
 0.917
A0A178ALT9
ESCRT-II complex, vps25 subunit.
    
 
 0.903
A0A178AHH5
DUF1857-domain-containing protein.
   
 0.846
A0A178ARA5
Uncharacterized protein.
    
 
 0.825
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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