Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ARL2Uncharacterized protein. (756 aa)    
Predicted Functional Partners:
A0A178B0J3
U-box-domain-containing protein.
    
 0.736
A0A178A7U4
Periplasmic binding protein-like II.
    
 0.720
A0A178AV38
Uncharacterized protein.
    
  0.678
A0A178ABK5
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
 0.631
A0A178AG80
Uncharacterized protein.
    
  0.630
A0A178AWS4
T-complex protein 1 subunit gamma.
    
  0.630
A0A178BA77
Uncharacterized protein.
    
  0.630
A0A178BAE3
T-complex protein 1 subunit delta.
    
  0.630
A0A178AWS0
DUF1682-domain-containing protein.
    
  0.626
A0A178AD00
T-complex protein 1 subunit zeta.
    
  0.624
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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