Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ARN7CBD9-like protein. (517 aa)    
Predicted Functional Partners:
A0A178AH85
MRP-L46 domain-containing protein.
   
   0.712
A0A178AQ02
Mitochondrial 54S ribosomal protein YmL9.
   
   0.703
A0A178BA93
MRP-S28 domain-containing protein.
   
   0.687
A0A178AMA8
Uncharacterized protein.
   
 
 0.682
A0A178B2R0
Ribosomal protein L27.
   
 
 0.672
A0A178ABC4
Uncharacterized protein.
   
   0.665
A0A178AM36
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.660
A0A178ARE4
Ribosomal protein L15.
   
   0.652
A0A178ASL3
50S ribosomal protein-like protein L13.
   
 
 0.652
A0A178AB55
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
   0.648
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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