Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
A0A178ARU2PAP/OAS1 substrate-binding domain-containing protein. (734 aa)    
Predicted Functional Partners:
A0A178BCA8
DUF3453 domain-containing protein.
    
 0.885
A0A178AIX3
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.797
A0A178AKS1
Insert subdomain of RNA polymerase alpha subunit.
    
  0.797
A0A178AU90
DNA-directed RNA polymerases I.
    
  0.797
A0A178B4G2
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.797
A0A178B885
RNA polymerase Rpb6.
    
  0.797
A0A178BAE4
RBP11-like subunits of RNA polymerase.
    
  0.797
A0A178AI45
RPOL9 domain-containing protein.
    
  0.795
A0A178AWR4
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.779
A0A178ATE2
Protein kinase rad3; Belongs to the PI3/PI4-kinase family.
    
  0.760
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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