Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ARW0Di-copper centre-containing protein. (768 aa)    
Predicted Functional Partners:
A0A178AGA7
Di-copper centre-containing protein.
  
  
 
0.889
A0A178B2T2
Di-copper centre-containing protein.
    
  0.882
A0A178BDU2
Di-copper centre-containing protein.
    
  0.882
A0A178AEA0
Dopa decarboxylase-like protein.
     
  0.874
A0A178AEW7
Histidinol-phosphate aminotransferase.
     
  0.874
A0A178AK65
Aspartate aminotransferase.
     
  0.874
A0A178B188
Aspartate aminotransferase.
     
  0.871
A0A178AH92
Di-copper centre-containing protein.
    
  0.868
A0A178AS37
Di-copper centre-containing protein.
    
  0.780
A0A178B1W6
Di-copper centre-containing protein.
    
  0.780
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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