Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AS47Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
IQ06DRAFT_7947
SPC25-domain-containing protein.
   
 0.976
A0A178AR68
Signal peptidase subunit 3.
   
 0.965
A0A178AZ43
Microsomal signal peptidase 12 kDa subunit.
   
 0.964
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.852
cyn1-2
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.852
A0A178B8U4
Uncharacterized protein.
    
  0.741
A0A178AD83
Chromatin associated protein KTI12.
     
 0.716
A0A178ADA1
Uncharacterized protein.
     
 0.716
A0A178ALG7
Tryptophan synthase.
  
  
 0.640
A0A178ACG4
Mitochondrial inner membrane protease subunit.
     
 0.631
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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