Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AS62Homeobox-domain-containing protein. (551 aa)    
Predicted Functional Partners:
A0A178B280
Mitochondrial import inner membrane translocase, subunit Tim17/22.
    
 0.958
A0A178A931
Mitochondrial import inner membrane translocase subunit tim9.
   
 0.925
A0A178AIV9
Mitochondrial import inner membrane translocase subunit tim10.
   
 0.905
A0A178B406
Mitochondrial succinate dehydrogenase cytochrome b560 subunit C.
    
 0.851
A0A178AJK2
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.847
A0A178AZI2
Tim17-domain-containing protein.
    
 0.790
A0A178AMH5
SNF5-domain-containing protein.
    
 0.655
A0A178AM93
Tim44-domain-containing protein.
    
 0.639
A0A178APM8
Uncharacterized protein.
    
 0.634
A0A178ACI3
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.632
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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