STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AS69Trypsin-like protease-like protein 1; Belongs to the peptidase S1 family. (262 aa)    
Predicted Functional Partners:
A0A178AJZ4
Nitrate/nitrite transporter.
     
 0.734
A0A178AVC1
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.695
A0A178BEP5
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.695
A0A178AT23
Inosine monophosphate dehydrogenase.
    
  0.688
A0A178B4W8
Poly [ADP-ribose] polymerase.
   
  0.670
A0A178AA44
Uncharacterized protein.
    
  0.652
A0A178B9Y8
Uncharacterized protein; Belongs to the pirin family.
     
  0.629
A0A178BAJ6
Inosine monophosphate dehydrogenase.
     
  0.629
A0A178B808
Calponin-homology (CH) domain-containing protein.
    
 0.624
A0A178AUM1
Annexin.
    
 0.620
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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