Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ASA2Macro domain-like protein. (589 aa)    
Predicted Functional Partners:
A0A178AYU7
Histone H2A; Belongs to the histone H2A family.
    
  0.746
A0A178A8Z7
Uncharacterized protein.
    
  0.702
A0A178B035
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.702
A0A178B5R7
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.702
A0A178AT17
Histone H2B; Belongs to the histone H2B family.
    
 0.689
A0A178A942
Hist_deacetyl domain-containing protein.
    
  0.686
A0A178ARI0
Histone H2A; Belongs to the histone H2A family.
    
  0.686
A0A178B1R8
DUF1903-domain-containing protein.
    
  0.686
A0A178B6C8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.686
A0A178AV54
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
  0.672
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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