STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BDW_10285CDF family heavy metal/H(+) antiporter; COG2217 Cation transport ATPase. (281 aa)    
Predicted Functional Partners:
BDW_10280
CzcA family heavy metal efflux protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.833
BDW_08250
Cation-efflux system membrane protein; COG1230 Co/Zn/Cd efflux system component.
 
     0.767
BDW_10265
Transcriptional regulator, ArsR family protein; COG0640 Predicted transcriptional regulators.
     
 0.759
BDW_10270
COG1538 Outer membrane protein.
       0.751
BDW_10275
Hypothetical protein.
       0.736
BDW_10435
Putative metal transporting P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.668
BDW_10255
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG2072 Predicted flavoprotein involved in K+ transport.
 
    0.617
BDW_10315
COG2217 Cation transport ATPase.
 
  
 0.549
BDW_10260
Hypothetical protein.
       0.532
BDW_01305
COG0785 Cytochrome c biogenesis protein.
    
 0.432
Your Current Organism:
Bdellovibrio bacteriovorus W
NCBI taxonomy Id: 765869
Other names: B. bacteriovorus W
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.