STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379525_02528Unannotated protein. (456 aa)    
Predicted Functional Partners:
GCA_000379525_02527
Unannotated protein.
 
  
 0.963
GCA_000379525_02529
Unannotated protein.
 
     0.955
GCA_000379525_02526
Unannotated protein.
 
  
 0.952
GCA_000379525_02530
Unannotated protein.
       0.820
GCA_000379525_03648
Unannotated protein.
 
  
 0.697
GCA_000379525_00238
Unannotated protein.
  
     0.427
GCA_000379525_02531
Unannotated protein.
       0.424
GCA_000379525_03647
Unannotated protein.
 
  
 0.423
GCA_000379525_04944
Unannotated protein.
  
     0.404
GCA_000379525_04301
Unannotated protein.
  
     0.401
Your Current Organism:
Lamprocystis purpurea
NCBI taxonomy Id: 765909
Other names: L. purpurea DSM 4197, Lamprocystis purpurea DSM 4197, Lamprocystis purpurea str. DSM 4197, Lamprocystis purpurea strain DSM 4197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.