STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379525_03313Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_000379525_03314
Unannotated protein.
       0.773
GCA_000379525_03535
Unannotated protein.
   
 0.743
GCA_000379525_00323
Unannotated protein.
    
 0.727
GCA_000379525_00324
Unannotated protein.
    
 0.727
GCA_000379525_04445
Unannotated protein.
    
  0.712
GCA_000379525_03287
Unannotated protein.
  
 0.666
GCA_000379525_00139
Unannotated protein.
  
 
  0.656
GCA_000379525_01349
Unannotated protein.
  
 0.650
GCA_000379525_03312
Unannotated protein.
 
    
0.644
GCA_000379525_03210
Unannotated protein.
     
 0.639
Your Current Organism:
Lamprocystis purpurea
NCBI taxonomy Id: 765909
Other names: L. purpurea DSM 4197, Lamprocystis purpurea DSM 4197, Lamprocystis purpurea str. DSM 4197, Lamprocystis purpurea strain DSM 4197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.