STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379525_04804Unannotated protein. (571 aa)    
Predicted Functional Partners:
GCA_000379525_05117
Unannotated protein.
    
   0.891
GCA_000379525_04811
Unannotated protein.
 
 
   0.789
GCA_000379525_01320
Unannotated protein.
 
 
   0.771
GCA_000379525_04290
Unannotated protein.
  
     0.658
GCA_000379525_04090
Unannotated protein.
  
     0.596
GCA_000379525_00030
Unannotated protein.
  
     0.563
GCA_000379525_01216
Unannotated protein.
  
     0.522
GCA_000379525_02208
Unannotated protein.
   
    0.487
GCA_000379525_03626
Unannotated protein.
  
     0.477
GCA_000379525_02885
Unannotated protein.
 
 
   0.473
Your Current Organism:
Lamprocystis purpurea
NCBI taxonomy Id: 765909
Other names: L. purpurea DSM 4197, Lamprocystis purpurea DSM 4197, Lamprocystis purpurea str. DSM 4197, Lamprocystis purpurea strain DSM 4197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.