STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379525_05840Unannotated protein. (350 aa)    
Predicted Functional Partners:
GCA_000379525_05841
Unannotated protein.
 
  
 0.958
GCA_000379525_04730
Unannotated protein.
   
    0.790
GCA_000379525_00174
Unannotated protein.
   
    0.599
GCA_000379525_05897
Unannotated protein.
   
    0.596
GCA_000379525_05852
Unannotated protein.
 
  
 0.467
GCA_000379525_03868
Unannotated protein.
    
  0.464
GCA_000379525_00420
Unannotated protein.
    
  0.457
GCA_000379525_05839
Unannotated protein.
       0.455
GCA_000379525_00421
Unannotated protein.
    
  0.409
GCA_000379525_03865
Unannotated protein.
    
  0.409
Your Current Organism:
Lamprocystis purpurea
NCBI taxonomy Id: 765909
Other names: L. purpurea DSM 4197, Lamprocystis purpurea DSM 4197, Lamprocystis purpurea str. DSM 4197, Lamprocystis purpurea strain DSM 4197
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.