STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05396.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1235 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.897
AHF03384.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.809
AHF03375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.805
AHF02891.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.804
AHF03359.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.803
AHF03387.1
Chain length-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
AHF03393.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
AHF03383.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.783
AHF03374.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
  
 0.757
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.