STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05430.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (651 aa)    
Predicted Functional Partners:
AHF03467.1
CRISPR-associated protein Cas4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.799
cas2
CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
  
 0.792
AHF03468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
cas1
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
  
 0.788
AHF03469.1
CRISPR-associated protein Csc2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
AHF03471.1
CRISPR-associated protein Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.775
AHF03470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.758
AHF03705.1
CRISPR-associated protein Cse4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.756
AHF03704.1
CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.753
AHF03706.1
CRISPR-associated protein Cse1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.639
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.