STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF03895.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
AHF03894.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
AHF03892.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
AHF03893.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
AHF03565.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
AHF04386.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
AHF05477.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.561
AHF02740.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
AHF03389.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
AHF02841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
AHF03352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.