STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05621.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (398 aa)    
Predicted Functional Partners:
AHF04858.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.835
AHF04860.1
Secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.821
AHF04859.1
N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
AHF05620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
0.778
AHF05619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
0.774
AHF04857.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.687
AHF03144.1
Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.563
AHF05616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the bacterial secretin family.
  
  
 0.529
AHF05275.1
General secretion pathway protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.520
AHF05618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.505
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.