STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05047.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)    
Predicted Functional Partners:
AHF05045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
AHF02896.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.980
AHF02712.1
Toluene ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.952
AHF02897.1
Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.952
AHF05044.1
Ryanodine receptor Ryr; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
AHF02713.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
AHF02715.1
Toluene tolerance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
AHF05046.1
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.907
AHF02714.1
Organic solvent ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.903
AHF02716.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.845
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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