STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05081.1Ribulose bisphosphate carboxylase small chain; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)    
Predicted Functional Partners:
rbcL-2
Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.
 
 0.997
rbcL
Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.993
AHF02944.1
Ribulose-bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
AHF04692.1
Ribulose bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.983
AHF05642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.933
AHF04762.1
Ribulose bisphosphate carboxylase small chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.904
AHF05008.1
Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.865
AHF05077.1
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.767
AHF05078.1
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.766
AHF05080.1
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.752
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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