STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbcL-2Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site. (471 aa)    
Predicted Functional Partners:
AHF04762.1
Ribulose bisphosphate carboxylase small chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
AHF05081.1
Ribulose bisphosphate carboxylase small chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
AHF05642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.968
AHF04692.1
Ribulose bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.928
AHF02944.1
Ribulose-bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.927
rbcL
Ribulose bisophosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
  
  
 
0.900
AHF05008.1
Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.857
AHF05080.1
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.718
AHF05079.1
Carboxysome shell protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.676
AHF02689.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.659
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.