STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF05263.1Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AHF04940.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.786
AHF04941.1
N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.786
AHF04858.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.784
AHF05280.1
General secretion pathway protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.783
AHF05273.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.709
AHF05269.1
Type IV pilus secretin PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.523
AHF05261.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
AHF05262.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
AHF05264.1
Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.483
Your Current Organism:
Marichromatium purpuratum
NCBI taxonomy Id: 765910
Other names: M. purpuratum 984, Marichromatium purpuratum 984, Marichromatium purpuratum str. 984, Marichromatium purpuratum strain 984
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.