STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL72285.1PFAM: Heme oxygenase. (214 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.901
AFL72284.1
Putative quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family.
       0.773
AFL75126.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
   
 0.772
AFL74305.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
   
 0.764
AFL74325.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase); PFAM: GAF domain; Phytochrome region; PAS fold.
 
   
 0.751
AFL74457.1
PFAM: Phosphate-selective porin O and P.
  
     0.629
AFL72488.1
PFAM: Protein of unknown function (DUF2868).
  
     0.613
AFL74510.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold.
 
   
 0.487
AFL74877.1
Methylase of chemotaxis methyl-accepting protein; PFAM: CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; PAS fold.
 
     0.449
AFL76046.1
Diguanylate cyclase (GGDEF) domain-containing protein; PFAM: EAL domain; GGDEF domain; GAF domain; Phytochrome region; PAS fold; TIGRFAM: photoactive yellow protein; diguanylate cyclase (GGDEF) domain.
 
   
 0.443
Your Current Organism:
Thiocystis violascens
NCBI taxonomy Id: 765911
Other names: T. violascens DSM 198, Thiocystis violascens DSM 198, Thiocystis violascens str. DSM 198, Thiocystis violascens strain DSM 198
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